Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933829.1_cds_XP_016480017.1_71500
CDS Infomation

[gene=LOC107801246] [db_xref=GeneID:107801246] [protein=phosphoglucan phosphatase LSF1, chloroplastic-like] [protein_id=XP_016480017.1] [location=join(14444..14746,15388..15494,15615..16074,16326..16397,17094..17215,17544..17759,18198..18303,18535..18647,19357..19501,19780..19902)] [gbkey=CDS]
Sequence

ATGTGTTCACTACAAGTTCCAAATTACAGAGTTTTCGATCACTCTTCAGTTAATTTTTCA
AAGAAATGTGTAATTTACTCTTCATTTTGGGGACTGGAGTTGTGCTTTAGCGACAGACGG
TCTAAAGCTAGTATGGCGGTGAATCGACGGGGAAATCGGAAGGTTTATGCGATGTCTACC
GCTAGTGTTTCGCCGTTCAAGATGAATTTGAATGAGTATATGGTTACACTTGAAAAACCG
CTTGGTATTCGCTTCGCGATTTCTGTTGATGGCAAAGTTTTCGTTCATGCTCTTAAGAAA
GGGGGAAATGCCGAGAAATCAAGAATTATAATGGTTGGTGATACATTGAAAAAGGCAAGC
GACTCTTCGGGCGGGGGGCTAATTGAGATCAAAGACTTCGGCGATACAGAGAAGATGATG
AAAGAGAACTCAGGGCCTTGTAGTCTGGTTCTTGAGAGACCATTTTTCCCATTTCCTATC
CACCAGCTATATCTTATGAATGATATTGATATTCAATATAATAGAGGTCGTGTTCCTGTT
TCTACATGGAACAAAAATTTACTTGCCTCCAACTTGCGAACACCTGCTGAGGGCAGTGGG
AACTGCGGATTTGTAGTATTTTCCCCCAAGTTTCTAGCTTTAAAAGGATGGGAGGTTCTA
AGTGATCAAGATCAAATCAGGCAACAAGGAAAGCTGAATGGCACCCCTTCTTTACCATTT
AGCCCAATTATCAACATATTCTCTGAGAAAGACATAGGAGATTCTGAATGGGCACACGGG
AGTTTCCCATTGGAAGAATATGCGAAGGCGTTGGATCGTTCAAAGGGAGAACTGTATTAC
AATCATGATCTTGGTATCCGTTACAGCAAGATTACGGAGCAAATATATGTGGGATCGTGC
ATACAAAAGGAAGCTGATGTAGAAATGCTGTCAGATGTTGTGGGGATCACCGCTGTACTG
AATTTTCAGAGTGGGATCGAGGCTGAAAATTGGGGAATTAATGTCAACATAATCAATGAA
TCGTGCCAAAGGTTTAACATCCTTATGATCAACTATCCCATAAGGGAAGGTGATTCATTT
GACATGAGAAAGAAACTTCCGTTTTGCGTTGGTCTTCTTCTACGCCTATTGAAAAAGAAC
CACCGAGTCTATGTGACATGTACAACTGGTTTTGATAGATCCCCTGCTTGTGTAATAGCT
TACCTTCACTGGATGACAGATACTTCCCTTCATGCAGCCTATAATTTTGTTACTGGGTTG
CATTCATGCAAGCCTGACAGACCAGCCATTGCCTGGGCAACATGGGATCTCATAGCGATG
GTGGAAACCGGTGCACATGATGGGCCTGCAACACATGCAGTAACCTTTGTGTGGAACGGA
CATGAGGGGGAGGATGTGTACTTGGTTGGAGATTTTACAGGTAACTGGAAAGAACCAATT
AAGGCAGTCCACAAAGGTGGCCCAAGATTTGAGGCTGAAGTTAGACTTTCACAGGGAAAG
TACCTTTATAAGTACATTATTAGTGGAGACTGGAGGCATTCAACCTCTTCACCAACTGAA
AGAGATGATAGTGGAAATCTCAATAATGTAATTGTTGTTGGTGATGTTGCTAGTGTGAGG
CCTACTGTTCAACAACAAAAGAAGGACGCAAATATTATGAAGGTCATTGAGAGGCCATTG
ACAGAAAATGAGCGCTTTATGCTGGCAAAAGCTGCTCGATGTGTTGCATTCTCTATCTGC
CCAATAAGGCTAGCACCGAAAAAATAG

Peptide Sequence

PEP ID

XP_016480017.1
PEP Infomation

PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic-like [Nicotiana tabacum]
Sequence

MCSLQVPNYRVFDHSSVNFSKKCVIYSSFWGLELCFSDRRSKASMAVNRRGNRKVYAMST
ASVSPFKMNLNEYMVTLEKPLGIRFAISVDGKVFVHALKKGGNAEKSRIIMVGDTLKKAS
DSSGGGLIEIKDFGDTEKMMKENSGPCSLVLERPFFPFPIHQLYLMNDIDIQYNRGRVPV
STWNKNLLASNLRTPAEGSGNCGFVVFSPKFLALKGWEVLSDQDQIRQQGKLNGTPSLPF
SPIINIFSEKDIGDSEWAHGSFPLEEYAKALDRSKGELYYNHDLGIRYSKITEQIYVGSC
IQKEADVEMLSDVVGITAVLNFQSGIEAENWGINVNIINESCQRFNILMINYPIREGDSF
DMRKKLPFCVGLLLRLLKKNHRVYVTCTTGFDRSPACVIAYLHWMTDTSLHAAYNFVTGL
HSCKPDRPAIAWATWDLIAMVETGAHDGPATHAVTFVWNGHEGEDVYLVGDFTGNWKEPI
KAVHKGGPRFEAEVRLSQGKYLYKYIISGDWRHSTSSPTERDDSGNLNNVIVVGDVASVR
PTVQQQKKDANIMKVIERPLTENERFMLAKAARCVAFSICPIRLAPKK

Transcript Sequence

Gene sequence data has not been registered.